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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs1910264 chr9:85605777 C/T TFDP3 chrX:132350697-132352376:- 0.91 9.81 1.99E-13 Box Plot
ACC rs191682543 chr7:17265991 A/G TFDP3 chrX:132350697-132352376:- 0.86 8.09 9.3E-11 Box Plot
ACC rs192085056 chr5:120316454 G/A GAGE2D chrX:49207160-49214420:+ 1.22 11.62 4.6E-16 Box Plot
ACC rs192506339 chr13:105086360 A/T DUPD1 chr10:76797594-76818272:- 1.17 10.27 4.11E-14 Box Plot
ACC rs1947165 chr2:107394868 G/A PRAMEF16 chr1:13495254-13498260:+ 0.67 9.56 4.72E-13 Box Plot
ACC rs1965659 chr12:110132304 A/C OR5V1 chr6:29323007-29399744:- -0.56 -7.94 1.57E-10 Box Plot
ACC rs1976058 chr2:111792734 T/C PRHOXNB chr13:28552243-28562774:- 0.59 8.09 9.34E-11 Box Plot
ACC rs1982192 chr5:71540604 T/C GDPD5 chr11:75145685-75236948:- -0.77 -7.75 3.21E-10 Box Plot
ACC rs1987046 chr9:96540946 C/A PLEKHA7 chr11:16798864-17035990:- -1.1 -7.56 6.36E-10 Box Plot
ACC rs199785079 chr6:62430395 C/T PRHOXNB chr13:28552243-28562774:- 0.59 7.82 2.45E-10 Box Plot
ACC rs200204184 chr2:16880104 T/TTA TFDP3 chrX:132350697-132352376:- 1.08 8.56 1.68E-11 Box Plot
ACC rs200236309 chr8:113001975 AT/A KRT6C chr12:52862300-52867569:- 0.85 9.67 3.27E-13 Box Plot
ACC rs200428648 chr18:37001552 GCTT/G PRHOXNB chr13:28552243-28562774:- 0.61 7.99 1.34E-10 Box Plot
ACC rs200616406 chr3:32340308 C/T OR5V1 chr6:29323007-29399744:- 0.64 7.74 3.25E-10 Box Plot
ACC rs200712472 chr8:112753777 G/GTT KRT6C chr12:52862300-52867569:- 0.71 8.21 5.9E-11 Box Plot